<?xml version="1.0" encoding="UTF-8"?>
<rss version="2.0"
	xmlns:content="http://purl.org/rss/1.0/modules/content/"
	xmlns:wfw="http://wellformedweb.org/CommentAPI/"
	xmlns:dc="http://purl.org/dc/elements/1.1/"
	xmlns:atom="http://www.w3.org/2005/Atom"
	xmlns:sy="http://purl.org/rss/1.0/modules/syndication/"
	xmlns:slash="http://purl.org/rss/1.0/modules/slash/"
	>

<channel>
	<title>Olhovsky &#187; GPU</title>
	<atom:link href="http://www.olhovsky.com/tag/gpu/feed/" rel="self" type="application/rss+xml" />
	<link>http://www.olhovsky.com</link>
	<description>Programming, meet art.</description>
	<lastBuildDate>Mon, 23 Jan 2012 05:19:58 +0000</lastBuildDate>
	<language>en</language>
	<sy:updatePeriod>hourly</sy:updatePeriod>
	<sy:updateFrequency>1</sy:updateFrequency>
	<generator>http://wordpress.org/?v=3.1.2</generator>
		<item>
		<title>2D CDF 9/7 Wavelet Transform in Python</title>
		<link>http://www.olhovsky.com/2009/03/2d-cdf-97-wavelet-transform-in-python/</link>
		<comments>http://www.olhovsky.com/2009/03/2d-cdf-97-wavelet-transform-in-python/#comments</comments>
		<pubDate>Tue, 17 Mar 2009 11:40:48 +0000</pubDate>
		<dc:creator>olhovsky</dc:creator>
				<category><![CDATA[Coding]]></category>
		<category><![CDATA[compression]]></category>
		<category><![CDATA[daubechies]]></category>
		<category><![CDATA[GPU]]></category>
		<category><![CDATA[jpeg2000]]></category>
		<category><![CDATA[lifting]]></category>
		<category><![CDATA[python]]></category>
		<category><![CDATA[wavelet]]></category>

		<guid isPermaLink="false">http://www.olhovsky.com/?p=17</guid>
		<description><![CDATA[As promised, here is an implementation of the Cohen-Daubechies-Feauveau 9 tap / 7 tap wavelet transform on a 2D signal in Python. This is the same transform used in the JPEG2000 codec. ''' 2D CDF 9/7 Wavelet Forward and Inverse Transform (lifting implementation) &#8230; <a href="http://www.olhovsky.com/2009/03/2d-cdf-97-wavelet-transform-in-python/">Continue reading <span class="meta-nav">&#8594;</span></a>]]></description>
			<content:encoded><![CDATA[<p>As promised, <a href="http://olhovsky.com/content/wavelet/2dwavelet97lift.py" target="_blank">here is an implementation</a> of the Cohen-Daubechies-Feauveau 9 tap / 7 tap wavelet transform on a 2D signal in Python. This is the same transform used in the JPEG2000 codec.</p>
<pre class="brush:python">'''
2D CDF 9/7 Wavelet Forward and Inverse Transform (lifting implementation)

This code is provided "as is" and is given for educational purposes.
2008 - Kris Olhovsky - code.inquiries@olhovsky.com
'''

from PIL import Image # Part of the standard Python Library

''' Example matrix as a list of lists: '''
mat4x4 = [
         [0,   1,  2,  3], # Row 1
         [4,   5,  6,  7], # Row 2
         [8,   9, 10, 11], # Row 3
         [12, 13, 14, 15], # Row 4
         ]                 # We don't do anything with this matrix.
                           # It's just here for clarification.

def fwt97_2d(m, nlevels=1):
    ''' Perform the CDF 9/7 transform on a 2D matrix signal m.
    nlevel is the desired number of times to recursively transform the
    signal. '''

    w = len(m[0])
    h = len(m)
    for i in range(nlevels):
        m = fwt97(m, w, h) # cols
        m = fwt97(m, w, h) # rows
        w /= 2
        h /= 2

    return m

def iwt97_2d(m, nlevels=1):
    ''' Inverse CDF 9/7 transform on a 2D matrix signal m.
        nlevels must be the same as the nlevels used to perform the fwt.
    '''

    w = len(m[0])
    h = len(m)

    # Find starting size of m:
    for i in range(nlevels-1):
        h /= 2
        w /= 2

    for i in range(nlevels):
        m = iwt97(m, w, h) # rows
        m = iwt97(m, w, h) # cols
        h *= 2
        w *= 2

    return m

def fwt97(s, width, height):
    ''' Forward Cohen-Daubechies-Feauveau 9 tap / 7 tap wavelet transform
    performed on all columns of the 2D n*n matrix signal s via lifting.
    The returned result is s, the modified input matrix.
    The highpass and lowpass results are stored on the left half and right
    half of s respectively, after the matrix is transposed. '''

    # 9/7 Coefficients:
    a1 = -1.586134342
    a2 = -0.05298011854
    a3 = 0.8829110762
    a4 = 0.4435068522

    # Scale coeff:
    k1 = 0.81289306611596146 # 1/1.230174104914
    k2 = 0.61508705245700002 # 1.230174104914/2
    # Another k used by P. Getreuer is 1.1496043988602418

    for col in range(width): # Do the 1D transform on all cols:
        ''' Core 1D lifting process in this loop. '''
        ''' Lifting is done on the cols. '''

        # Predict 1. y1
        for row in range(1, height-1, 2):
            s[row][col] += a1 * (s[row-1][col] + s[row+1][col])
        s[height-1][col] += 2 * a1 * s[height-2][col] # Symmetric extension

        # Update 1. y0
        for row in range(2, height, 2):
            s[row][col] += a2 * (s[row-1][col] + s[row+1][col])
        s[0][col] +=  2 * a2 * s[1][col] # Symmetric extension

        # Predict 2.
        for row in range(1, height-1, 2):
            s[row][col] += a3 * (s[row-1][col] + s[row+1][col])
        s[height-1][col] += 2 * a3 * s[height-2][col]

        # Update 2.
        for row in range(2, height, 2):
            s[row][col] += a4 * (s[row-1][col] + s[row+1][col])
        s[0][col] += 2 * a4 * s[1][col]

    # de-interleave
    temp_bank = [[0]*width for i in range(height)]
    for row in range(height):
        for col in range(width):
            # k1 and k2 scale the vals
            # simultaneously transpose the matrix when deinterleaving
            if row % 2 == 0: # even
                temp_bank[col][row/2] = k1 * s[row][col]
            else:            # odd
                temp_bank[col][row/2 + height/2] = k2 * s[row][col]

    # write temp_bank to s:
    for row in range(width):
        for col in range(height):
            s[row][col] = temp_bank[row][col]

    return s

def iwt97(s, width, height):
    ''' Inverse CDF 9/7. '''

    # 9/7 inverse coefficients:
    a1 = 1.586134342
    a2 = 0.05298011854
    a3 = -0.8829110762
    a4 = -0.4435068522

    # Inverse scale coeffs:
    k1 = 1.230174104914
    k2 = 1.6257861322319229

    # Interleave:
    temp_bank = [[0]*width for i in range(height)]
    for col in range(width/2):
        for row in range(height):
            # k1 and k2 scale the vals
            # simultaneously transpose the matrix when interleaving
            temp_bank[col * 2][row] = k1 * s[row][col]
            temp_bank[col * 2 + 1][row] = k2 * s[row][col + width/2]

    # write temp_bank to s:
    for row in range(width):
        for col in range(height):
            s[row][col] = temp_bank[row][col]

    for col in range(width): # Do the 1D transform on all cols:
        ''' Perform the inverse 1D transform. '''

        # Inverse update 2.
        for row in range(2, height, 2):
            s[row][col] += a4 * (s[row-1][col] + s[row+1][col])
        s[0][col] += 2 * a4 * s[1][col]

        # Inverse predict 2.
        for row in range(1, height-1, 2):
            s[row][col] += a3 * (s[row-1][col] + s[row+1][col])
        s[height-1][col] += 2 * a3 * s[height-2][col]

        # Inverse update 1.
        for row in range(2, height, 2):
            s[row][col] += a2 * (s[row-1][col] + s[row+1][col])
        s[0][col] +=  2 * a2 * s[1][col] # Symmetric extension

        # Inverse predict 1.
        for row in range(1, height-1, 2):
            s[row][col] += a1 * (s[row-1][col] + s[row+1][col])
        s[height-1][col] += 2 * a1 * s[height-2][col] # Symmetric extension

    return s

def seq_to_img(m, pix):
    ''' Copy matrix m to pixel buffer pix.
    Assumes m has the same number of rows and cols as pix. '''
    for row in range(len(m)):
        for col in range(len(m[row])):
            pix[col,row] = m[row][col]</pre>
<p>And here is an example usage:</p>
<pre class="brush:python">if __name__ == "__main__":
    # Load image.
    im = Image.open("test1_512.png") # Must be a single band image! (grey)

    # Create an image buffer object for fast access.
    pix = im.load()

    # Convert the 2d image to a 1d sequence:
    m = list(im.getdata())

    # Convert the 1d sequence to a 2d matrix.
    # Each sublist represents a row. Access is done via m[row][col].
    m = [m[i:i+im.size[0]] for i in range(0, len(m), im.size[0])]

    # Cast every item in the list to a float:
    for row in range(0, len(m)):
        for col in range(0, len(m[0])):
            m[row][col] = float(m[row][col])

    # Perform a forward CDF 9/7 transform on the image:
    m = fwt97_2d(m, 3)

    seq_to_img(m, pix) # Convert the list of lists matrix to an image.
    im.save("test1_512_fwt.png") # Save the transformed image.

    # Perform an inverse transform:
    m = iwt97_2d(m, 3)

    seq_to_img(m, pix) # Convert the inverse list of lists matrix to an image.
    im.save("test1_512_iwt.png") # Save the inverse transformation.</pre>
<p>This is a first step in a larger task of compressing a certain type of vertex data, which can be decompressed entirely by a GPU via an implementation written in shader code.</p>
<p>The reason for a Python implementation is to create a working, easy to understand version of the implementation. Not only for myself, but for the interwebs.</span></p>
<p>The Python code does use &#8220;height&#8221; and &#8220;width&#8221; variables, although in order to use rectangular images, some adjustments need to be made. This code also assumes that your images have width and height of the form 2^n. E.g. 1024 x 1024, 512 x 512, etc.</p>
<div id="attachment_25" class="wp-caption alignleft" style="width: 266px"><img class="size-full wp-image-25" title="test1_256" src="http://www.olhovsky.com/wp/wp-content/uploads/2009/03/test1_256.png" alt="Sample input image for transforming." width="256" height="256" /><p class="wp-caption-text">Sample input image for transforming.</p></div>
<div id="attachment_23" class="wp-caption alignleft" style="width: 266px"><img class="size-full wp-image-23" title="256fwt1_eg" src="http://www.olhovsky.com/wp/wp-content/uploads/2009/03/256fwt1_eg.png" alt="Image after a single level CDF 9/7 transform." width="256" height="256" /><p class="wp-caption-text">Image after a single level CDF 9/7 transform.</p></div>
<div id="attachment_24" class="wp-caption alignleft" style="width: 266px"><img class="size-full wp-image-24" title="256fwt2_eg" src="http://www.olhovsky.com/wp/wp-content/uploads/2009/03/256fwt2_eg.png" alt="2 level CDF 9/7 wavelet transformed image" width="256" height="256" /><p class="wp-caption-text">2 level CDF 9/7 wavelet transformed image</p></div>
]]></content:encoded>
			<wfw:commentRss>http://www.olhovsky.com/2009/03/2d-cdf-97-wavelet-transform-in-python/feed/</wfw:commentRss>
		<slash:comments>7</slash:comments>
		</item>
	</channel>
</rss>

